Search Publications from PubMed

How to use

  • Select one or more scientists from the dropdown, then click Search — or click Search All to fetch all 73 researchers.
  • This performs a live search on PubMed using the E-utilities API. For PMC full-text data availability extraction, fetching may take longer per paper.
  • Use the filters below to narrow results. Click any table row to expand details.



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Data Type

Study Focus

Model

Data Sharing

Fetch Settings


Limits how many PMC full-text lookups are done per scientist.

When enabled, papers with no data availability in PubMed XML will be looked up in PubMed Central. Only works for open-access articles.


What it does: Powers the AI to read abstract contexts.
How to get a key:
  1. Log in to the Anthropic Console
  2. Go to Settings > API Keys, click 'Create Key', and paste it above.
What it does: Fetches publications from PubMed. A key verifies your identity and boosts your fetch speed limit from 3 to 10 requests per second (over 3x faster).
How to get a key:
  1. Log in to NCBI using a 3rd-party account (Google, university, etc.).
  2. Click your username (top right) to go to Account Settings.
  3. Scroll to 'API Key Management', click 'Create an API Key', and paste it above.

PubMed E-utilities: Adaptive speed limits enabled.

Claude Haiku is used for classification.

Export

Download CSV (filtered)

Download CSV (all)

Fields: pmid, title, authors, journal, year, scientist, institution, data_type, focus, reasoning, da_category, da_category_data, da_category_code, da_repo_data, da_acc_data, da_repo_code, da_acc_code, da_raw.

Data Sharing Categories

🟢 Public Repository
GEO, SRA, Zenodo, Dryad, GitHub, figshare, ArrayExpress, ENA, OSF, CIL — with accession ID or link
🟡 Controlled Access
dbGaP, AMP-PD, Synapse, NIAGADS, EGAS, Terra — requires application or data use agreement, with ID/link
🟣 Mixed
Controlled-access data + publicly available code — e.g. GP2/dbGaP data with GitHub or Zenodo code
🔵 Upon Request
Available from corresponding author on request — contact email extracted where present
⚪ Not disclosed
Data are explicitly not shared, or no availability statement was found.